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Preheat oven to 350 degrees fahrenheit and line mini-muffin pans with paper liners.
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In a medium bowl mix shredded carrots, apple sauce, eggs and milk then set aside.
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In a large bowl mix whole wheat flour, cinnamon and baking powder.
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Once well combined add the wet carrot mixture to the flour mixture and stir until mixed.
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Spoon cupcake batter into paper liners until 1/2 to 2/3 full.
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Bake for 10 minutes, until a toothpick inserted in the middle come out clean.
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Cool 5 minutes in pans then remove and place on wire racks to cool completely.
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Makes 4 dozen mini-muffins